Insertion junction: CLIP2.026646_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.026646
Chromosome:chromosome 1
Location:5901648
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g042000 (1 of 1) PF00023//PF00612//PF13637//PF13857 - Ankyrin repeat (Ank) // IQ calmodulin-binding motif (IQ) // Ankyrin repeats (many copies) (Ank_4) // Ankyrin repeats (many copies) (Ank_5) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTACCGTATGCATTCCCTGTAGGCTAGATTCAGCCTGGGCAGCCTGTACG
Internal bar code:GGCTTCGGGTAGATTGTTTGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1264
LEAP-Seq percent confirming:86.2745
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTCGGCATGTGTGTCTGT
Suggested primer 2:CAGCATTCGCCCTTACAAGC