Insertion junction: CLIP2.026647_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.026647
Chromosome:chromosome 12
Location:8944576
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g545600 (1 of 4) IPR001841//IPR018957 - Zinc finger, RING-type // Zinc finger, C3HC4 RING-type intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCACAACTGCTCTTCCATTCCCTGCCCTTCCCTTGCCTGCCCACGCTT
Internal bar code:ACGCGAGAGCTTTGTTCGGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2473
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TCATCCCAAATCCACCTGCC
Suggested primer 2:AACCTCGCTATCTCCGCATG