Insertion junction: CLIP2.026663_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.026663
Chromosome:chromosome 3
Location:216040
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g144244 (1 of 1) IPR003593//IPR003840//IPR010285//IPR027417 - AAA+ ATPase domain // DNA helicase // DNA helicase Pif1-like // P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGGAGGGTGACTGGGGTTGGGGCAGGGCGATGGGCAAGGTAGGAAGGG
Internal bar code:ATTGGCCAGCGAGGAAAACTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:6681
LEAP-Seq percent confirming:40.2299
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:52
LEAP-Seq n unique pos:87

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCAGCGCATCACTTCATC
Suggested primer 2:GATCAGAGGCGGGGTTGTAG