Insertion junction: CLIP2.026680_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.026680
Chromosome:chromosome 10
Location:6067896
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g461851 (1 of 2) PTHR10724:SF7 - RIBOSOMAL PROTEIN S1-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCGTCAGCCCAGCAGCAGACAGCACAGCACACCCGCCCGTGTGCCCGAG
Internal bar code:GAAAAAATTGGGTGTCTTATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:797
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TCAGAATTGAACCCGCACGA
Suggested primer 2:GGCCTTCTGCTTCTGGGAAT