Insertion junction: CLIP2.026725_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.026725
Chromosome:chromosome 9
Location:188413
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCCCATCCGCATGCAGGCATGCTTGGGGCACGCCCAAAAATTTCGCGT
Internal bar code:CGGAGCAGGGGAAATAATGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3901
LEAP-Seq percent confirming:9.7561
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:37
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:TTAACTGTCCCGTGCCACTC
Suggested primer 2:TAGCTGTACGAGTGGGAGCT