Insertion junction: CLIP2.026730_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.026730
Chromosome:chromosome 9
Location:5791467
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g411150 (1 of 6) PTHR22916//PTHR22916:SF9 - GLYCOSYLTRANSFERASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGTGTGTGTGGGGGGGAGGGGGGAGGGGGGCTCGCAACTGCGCTTGGC
Internal bar code:AGGGAGTTCTGATCTCTACGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1341
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:AGTGCACATACCAGTCCGTG
Suggested primer 2:ACGCCAAAATCAACAGCACC