Insertion junction: CLIP2.026735_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.026735
Chromosome:chromosome 13
Location:4500625
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g602950 (1 of 1) IPR027050 - Nuclease SbcCD subunit C CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGGCGCCGCGCAAGCAGGCGGCGGCGGCGGTGGCGGCGGCGGAGTCGC
Internal bar code:AGTTCAAGATAAGGGCATGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:919
LEAP-Seq percent confirming:34.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:33
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCATCGCCCTCTTACATG
Suggested primer 2:GTTACTCAACCGGGAAGGGG