Insertion junction: CLIP2.026754_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.026754
Chromosome:chromosome 1
Location:4810678
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g033500 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGATACAAGGCCCTGTATGTCAGCAGGGCGCAGGAATCAGGCGCGTTCAG
Internal bar code:TTGGTGGCCATGCGATTATATA

Confirmation - LEAP-Seq

LEAP-Seq distance:2246
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGGGAGTCGCCAAGTAA
Suggested primer 2:CCACCCTCCAAATGACCTCC