Insertion junction: CLIP2.026758_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.026758
Chromosome:chromosome 12
Location:8523805
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g549300 MIP1 (1 of 2) PTHR19139:SF180 - AQUAPORIN-1; Aquaporin major intrinsic protein 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGATGAGCGCGGGCAATGGGCATATAGGGACAGTAGCCGACTGGGCCAGG
Internal bar code:GAAAAAAGGTGGTTAGCACAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2251
LEAP-Seq percent confirming:82.7586
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:GATCGATACGACTGGGCGTT
Suggested primer 2:CTATACAGTGCAGGCGAGGG