Insertion junction: CLIP2.026765_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.026765
Chromosome:chromosome 7
Location:1029549
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g319650 FXL4,FXL5 FixL-like PAS domain protein; (1 of 3) IPR000014//IPR013767 - PAS domain // PAS fold CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCACGGCGTCATCCTCCATGGACATGGACGTCAGGAAGTCGGGCTTGCT
Internal bar code:GCCTCTAGCCTTACTCCTGCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:273
LEAP-Seq percent confirming:23.8095
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGTACAAGAGGTGAGGGC
Suggested primer 2:CCAACTATAACAGCGCACGC