Insertion junction: CLIP2.026768_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.026768
Chromosome:chromosome 4
Location:1552837
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g213450 VPS2A Subunit of the ESCRT-III complex; (1 of 1) K12191 - charged multivesicular body protein 2A (CHMP2A) outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCAAAGCATACATACCGTCGAGCATCCTGCCTGCCGAACGCCGTCAATA
Internal bar code:GGATGGGGTAGTAAAACATTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:609
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGGTAGATGGGCAGGTCT
Suggested primer 2:AGAGTCGCACTGTAAAGCCC