Insertion junction: CLIP2.026774_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.026774
Chromosome:chromosome 8
Location:910645
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g361800 RPC31 (1 of 1) PF11705 - DNA-directed RNA polymerase III subunit Rpc31 (RNA_pol_3_Rpc31); DNA-directed RNA polymerase III intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTACGGTGCTATGCGACATGACGCATGTGGCAGATGCAGGCCCGGCAC
Internal bar code:AAATTTCCTTTGGCTAAGTGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2592
LEAP-Seq percent confirming:95.2381
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:TGCGTTCTTCGTTGCAACTG
Suggested primer 2:CGGTATCAGGGTCATCACCG