Insertion junction: CLIP2.026779_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.026779
Chromosome:chromosome 17
Location:1826813
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g709400 (1 of 1) PTHR12894//PTHR12894:SF17 - CNH DOMAIN CONTAINING // TRANSFORMING GROWTH FACTOR-BETA RECEPTOR-ASSOCIATED PROTEIN 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTATGGGGGGGTTGGTTTGAGTCCCCCACGGTCGCCCCACGCGACCCC
Internal bar code:TGAGGAAGATTAGGGACTACAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1233
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:ACACGCTCACATACCCGTTT
Suggested primer 2:ATCAGTCTCAAACAGCCGCA