Insertion junction: CLIP2.026784_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.026784
Chromosome:chromosome 3
Location:1554207
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g152150 (1 of 1) IPR007087//IPR013087//IPR015880 - Zinc finger, C2H2 // Zinc finger C2H2-type/integrase DNA-binding domain // Zinc finger, C2H2-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTGCTGGCTGGCGAAGGTGCGGTCGCAGTCGCCGCAGGCGAAGTCGCC
Internal bar code:TCTCTGCTGAGTCTCTAGACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2100
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TCAGAAGCACATGCAGGAGG
Suggested primer 2:TCTGTCCTGTTGCTCAGCTG