Insertion junction: CLIP2.026784_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.026784
Chromosome:chromosome 3
Location:1554376
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g152150 (1 of 1) IPR007087//IPR013087//IPR015880 - Zinc finger, C2H2 // Zinc finger C2H2-type/integrase DNA-binding domain // Zinc finger, C2H2-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACGGCGCGGAGGGTGCCAAGCCCGCGGCGGGTGGTCGCAGCCGTGGCCG
Internal bar code:GCTATAGCGAAGGAAGAGTGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3264
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TCTGTCCTGTTGCTCAGCTG
Suggested primer 2:TCAGAAGCACATGCAGGAGG