Insertion junction: CLIP2.026787_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.026787
Chromosome:chromosome 4
Location:2246978
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g220350 ATPVA3 Vacuolar ATP synthase subunit A; (1 of 3) K02154 - V-type H+-transporting ATPase subunit a (ATPeV0A, ATP6N) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAACTGGGTACTGTCAGCTTCACGGAGGGACAACGAGCTGGAGCGCGGC
Internal bar code:TTTTCTAACGGTCAATTCCTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1391
LEAP-Seq percent confirming:52.381
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:ACCCTCCCACAGATGATCCA
Suggested primer 2:TGAACCCTTTTGCCCCCTTT