Insertion junction: CLIP2.026794_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.026794
Chromosome:chromosome 3
Location:6180640
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g191200 RME3 (1 of 3) K06236 - collagen, type I/II/III/V/XI/XXIV/XXVII, alpha (COL1AS); RNA methylase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGACCGCCACTTCATCACGTGGTGGTTCTTGCGCACGTGCGGCGTGGGG
Internal bar code:GGAGACGCTCACACTCCCTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1531
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTGATGCCCTCATGCAGT
Suggested primer 2:TCCGTACCTCCTGCTAGCTT