Insertion junction: CLIP2.026795_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.026795
Chromosome:chromosome 12
Location:3445321
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g497450 FAP412 (1 of 21) IPR001611//IPR003591 - Leucine-rich repeat // Leucine-rich repeat, typical subtype; Flagellar Associated Protein 412 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTGGATTCATGGTCGGGAGGCCGCCATGGGGCTTGCAGTTGGAGTTTC
Internal bar code:AACAGTTAAAAGATTTGGATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1095
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCGTATTCCACCTTGGGC
Suggested primer 2:AGAGGCATGGAACTTGCGAA