Insertion junction: CLIP2.026796_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.026796
Chromosome:chromosome 5
Location:3329865
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g232500 FXL8 (1 of 2) IPR000014//IPR011990 - PAS domain // Tetratricopeptide-like helical domain; FixL-like PAS domain protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCAGAGACTGGTATCACCTGCTGCCCTGCCTCCCATAGCCCCACCCCCA
Internal bar code:ATGGTGCCACACTGGGTATATG

Confirmation - LEAP-Seq

LEAP-Seq distance:760
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:ACTACAGCACGACACAGGTG
Suggested primer 2:CACACACACAAGCACACGAG