Insertion junction: CLIP2.026798_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.026798
Chromosome:chromosome 7
Location:4596660
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g344200 (1 of 3) IPR000104//IPR020846 - Antifreeze protein, type I // Major facilitator superfamily domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCACCTGCCATACCCAGGCACAGCCCCGCCGCCGCCAGAAGTGTCGCC
Internal bar code:TCTCATCTGGTGATATTATGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:714
LEAP-Seq percent confirming:47.8261
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGAGTGTGTGTGTGCGTG
Suggested primer 2:TCATCGTCGTCAAACACCGT