Insertion junction: CLIP2.026808_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.026808
Chromosome:chromosome 12
Location:4985383
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g525000 (1 of 274) IPR020683 - Ankyrin repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCATCACTGCATCGAGACGCACATGCCACCAACACACGTGCTCCCTTATC
Internal bar code:AGATTCTCAATACTGAGTTAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2402
LEAP-Seq percent confirming:97.7273
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:TATGCACTGTCGGTAGCGAC
Suggested primer 2:GAGGTTATGAGCTGGGACCG