Insertion junction: CLIP2.026810_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.026810
Chromosome:chromosome 1
Location:5171224
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g036100 (1 of 1) K11790 - denticleless (DTL, CDT2, DCAF2) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGCTGCACTCCATGGCCAGGACCACCTCAAGCACCGCCTCCTCCACCTC
Internal bar code:TTAGGAAGAAACTCTTCCCCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2573
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CGGATCTGAGGAAGCTGCTT
Suggested primer 2:AGAATGGCCCGAAGTTGACG