Insertion junction: CLIP2.026811_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.026811
Chromosome:chromosome 9
Location:2141384
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g395800 (1 of 1) PF05907 - Eukaryotic protein of unknown function (DUF866) (DUF866) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTTTTGCACCCATCGATCGGCCCGCAGACCTTCCTTTTATGCATCCGAG
Internal bar code:CTTGTAGTAGAAACTTAGATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1679
LEAP-Seq percent confirming:93.1818
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:ACGCACTGTGAATCTGTCGT
Suggested primer 2:CACCACGTTGGCAAGACAAG