Insertion junction: CLIP2.026813_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.026813
Chromosome:chromosome 10
Location:5694588
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g459350 OPR49,RAP5 OctotricoPeptide Repeat protein 49; (1 of 2) IPR000104//IPR013584 - Antifreeze protein, type I // RAP domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCCCCGCACAACCCATACACACCCGCACACCACCTCATACGCCCTTTC
Internal bar code:GCTGCAACAGGTGGAGTGCAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2091
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:ATCCCCTCTCCCGTCTACAC
Suggested primer 2:GGCTACGACTTCACTGCGTA