Insertion junction: CLIP2.026813_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.026813
Chromosome:chromosome 10
Location:5694596
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g459350 OPR49,RAP5 OctotricoPeptide Repeat protein 49; (1 of 2) IPR000104//IPR013584 - Antifreeze protein, type I // RAP domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGACTCCTTGACGAGTCGAAATCAACCGAGCCCAGCAGGGCGTGAGGCG
Internal bar code:ACGGCAGTTAGTTACACGTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1224
LEAP-Seq percent confirming:84.6154
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTACGACTTCACTGCGTA
Suggested primer 2:ATCCCCTCTCCCGTCTACAC