Insertion junction: CLIP2.026821_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.026821
Chromosome:chromosome 4
Location:2261276
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCAACAAGACTCCTTAAGTACCAGTCTCTAGTATTGTGACATAGAACGA
Internal bar code:TAGTCAGTAGTAATATAGGTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1035
LEAP-Seq percent confirming:77.7778
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:CTACCAGTTCGCCGAGGATC
Suggested primer 2:ACTTGCGGTTTGGGACCTAG