Insertion junction: CLIP2.026827_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.026827
Chromosome:chromosome 12
Location:7281695
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g801466 (1 of 2) IPR028992 - Hedgehog/Intein (Hint) domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTTCATGAAATTGCTGAATGAAGTGAAGGAGGAGGTGGATGCTGAACAA
Internal bar code:GAATCTGAGAGGGAGTCGCAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2166
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:AGCGTCGCTTGTGTCCATAA
Suggested primer 2:CGTACCGTACCGACAGATGG