Insertion junction: CLIP2.026827_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.026827
Chromosome:chromosome 12
Location:7281696
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g801466 (1 of 2) IPR028992 - Hedgehog/Intein (Hint) domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCTTAACCTGTCCGTGCATGAGGGTCACACAGGTTTATCTTGTGCCAA
Internal bar code:GGTATCTGTATAATAGTCACGT

Confirmation - LEAP-Seq

LEAP-Seq distance:5412
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:73
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:73

Suggested primers for confirmation by PCR

Suggested primer 1:CGTACCGTACCGACAGATGG
Suggested primer 2:AGCGTCGCTTGTGTCCATAA