Insertion junction: CLIP2.026831_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.026831
Chromosome:chromosome 3
Location:8449515
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g212753 (1 of 1) PTHR21496//PTHR21496:SF6 - FERREDOXIN-RELATED // 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE-LIKE PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTCGCCGAGCGGGCCGCCCGTCGCGACCGACAGTCTAGGTATGTACCTA
Internal bar code:TGGGCCTGAAATCACGTGGGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1410
LEAP-Seq percent confirming:78.9474
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CACCACTTCACCGTCGTGTA
Suggested primer 2:CCAGCTCCTGAAACACTCGT