Insertion junction: CLIP2.026834_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.026834
Chromosome:chromosome 17
Location:5476980
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g739100 (1 of 1) K10666 - E3 ubiquitin-protein ligase RNF5 (RNF5) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTCGCTGATAAGCGCACCCCATTGGACGCCGACCTTCAGCGCATGCGC
Internal bar code:AACCGTGTACGTATGTTAGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2093
LEAP-Seq percent confirming:96.2963
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:AGTACTACGCATCGAGCAGC
Suggested primer 2:AGTTAACCCGTTTTGCGTGC