Insertion junction: CLIP2.026842_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.026842
Chromosome:chromosome 3
Location:5082372
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g180200 (1 of 12) IPR001680//IPR015943//IPR017986 - WD40 repeat // WD40/YVTN repeat-like-containing domain // WD40-repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCACACATGCACACCCACCCACCTGCGGCACGGCGGTGGTGGACACCTGC
Internal bar code:CCTTAGATCAGGAAGGAGGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1359
LEAP-Seq percent confirming:79.661
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGTCTGAAGTCGGTCGTA
Suggested primer 2:GCGAGGATTCCGGATTTTGC