Insertion junction: CLIP2.026844_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.026844
Chromosome:chromosome 10
Location:3390847
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g443850 (1 of 1) PTHR11851//PTHR11851:SF136 - METALLOPROTEASE // PROTEIN YHJJ intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGGGAACGGGTGGAAACAACCCCCTCCCTCTTCAGTGCATCCTGAAGT
Internal bar code:AACTCACGCGTATGTATAAAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:150
LEAP-Seq percent confirming:72.7273
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTCTTTCCCAATCCCCGA
Suggested primer 2:GACGAAGGGGGACGAAATGT