Insertion junction: CLIP2.026850_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.026850
Chromosome:chromosome 5
Location:1053066
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g247650 (1 of 32) IPR000536 - Nuclear hormone receptor, ligand-binding domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCTGCCCCCCCACTCCGCAATGGTACACGGCCCCCCCCCTCTTTCTTT
Internal bar code:ACCACTGCACTTCCGTATCTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2469
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GAACCCAAACAGTCGCCAAC
Suggested primer 2:ACCAGCAGTACAGCCAATCC