Insertion junction: CLIP2.026850_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.026850
Chromosome:chromosome 5
Location:1053066
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g247650 (1 of 32) IPR000536 - Nuclear hormone receptor, ligand-binding domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTACCGTTACGGAGGAGGGGGGGGGAACAGCCGTGTACCGTTACGGAGT
Internal bar code:ATAGACGTCGTGGGATGTGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:157
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:ACCAGCAGTACAGCCAATCC
Suggested primer 2:GAACCCAAACAGTCGCCAAC