Insertion junction: CLIP2.026866_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.026866
Chromosome:chromosome 9
Location:3338168
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g395473 intron
lncRNA_TCONS_00132474 intron
lncRNA_TCONS_00132476 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACATGTTCATCCCACCAAGTCACCCCGACCCCGACCAGCAACACGCGCC
Internal bar code:AGCAATCTAGTGGTTGTAACTC

Confirmation - LEAP-Seq

LEAP-Seq distance:3624
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTTTGACCAGCTCCCCAG
Suggested primer 2:AGTGTTGGGGTTGAGGTTGG