Insertion junction: CLIP2.026867_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.026867
Chromosome:chromosome 11
Location:534385
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467598 (1 of 1) IPR000104//IPR013763 - Antifreeze protein, type I // Cyclin-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGTACAGCGCAGCCTTGGAGGACGGCCCCGCCGCCGCCGCGGAGGCGGC
Internal bar code:TAGGTACCAGGTCATGGAGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:4847
LEAP-Seq percent confirming:89.5833
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:GTCACAGACGCCTTCAGTGA
Suggested primer 2:AGGTGATGGTGTTGAGGCTG