Insertion junction: CLIP2.026868_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.026868
Chromosome:chromosome 2
Location:4679391
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g107800 CNK9 NimA-related protein kinase; (1 of 15) K08857 - NIMA (never in mitosis gene a)-related kinase [EC:2.7.11.1] (NEK) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTCGTCGCAGCAGCACCTGCACGACCTCAGCGGCAGTGACTTCGACCTG
Internal bar code:ATTTAGGCCTTGCATACCAATC

Confirmation - LEAP-Seq

LEAP-Seq distance:2810
LEAP-Seq percent confirming:37.5
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TTACGCCGGTTAACCCTAGC
Suggested primer 2:GGTGTGTGTGCTAGCCAGAT