Insertion junction: CLIP2.026876_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.026876
Chromosome:chromosome 2
Location:7192230
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00137361

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTCCAGGAGATGAGGTAGACGCTTGCGGCCTCAGACTAGAGACGTGGC
Internal bar code:AAAGCGTGTGGATAGGTGGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3314
LEAP-Seq percent confirming:31.0345
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCAGCACTACACCCAGTC
Suggested primer 2:AGGTAGCCCTTGACAAGTGC