Insertion junction: CLIP2.026883_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.026883
Chromosome:chromosome 5
Location:2994249
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00229754

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCACGCGTCGCCATACAGACACAGTGACATACATGAATGCGCAACTCTG
Internal bar code:ATACTTCACTTAGCAAACTGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:565
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TTCTTGAACGGGTCGTGGAG
Suggested primer 2:GGTCGGTGAAACAAGGTTGC