Insertion junction: CLIP2.026895_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.026895
Chromosome:chromosome 8
Location:531141
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g359500 (1 of 1) 6.3.2.4 - D-alanine--D-alanine ligase / D-alanylalanine synthetase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGCAGCAGTGGACCGTCGTGGGGGGCCGGCGGAGGCGGAGCGAGGCGGC
Internal bar code:GCGGGATAAATATAGGTTGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1354
LEAP-Seq percent confirming:96.1538
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGGAGGGGAGAAAAAGCG
Suggested primer 2:CGTATGCGATGCAGTGTGTG