Insertion junction: CLIP2.026903_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.026903
Chromosome:chromosome 4
Location:2312253
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g220768 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCACCAGCAGCGCCACCGCCAGCACCACCACCGCCAGCAGCAGCACTG
Internal bar code:TTGGCCTCTCAGGGGTTGTGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:758
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGACGGTGAGCTTGGAT
Suggested primer 2:TTCTTTGCCTTTGCCTTCGC