Insertion junction: CLIP2.026945_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.026945
Chromosome:chromosome 14
Location:1106565
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g614750 CPNAT1,cpNAT1,NAT34 (1 of 1) 2.3.1.189 - Mycothiol synthase; Ribosome-associated chloroplast-localized N-acetyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTATGCGTTGGGGTGGGGTGGCAGAGGCTGGCTTCACTGGGGCCAAGTCC
Internal bar code:AAAGTTACGGTTGATACCCTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1400
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:AGGATGTCTCGCCAAATGCA
Suggested primer 2:ATCTCCCATCCTCCAGACCC