Insertion junction: CLIP2.026956_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.026956
Chromosome:chromosome 10
Location:314328
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g420000 (1 of 17) IPR029069 - HotDog domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTGCTGGACCAGGCGGAGCAGTCCGGCTTAGCCTTTCGCGTAACACAT
Internal bar code:GTAGGAAACGGGGAGTCGGGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:59
LEAP-Seq percent confirming:5.40541
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:35
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:GACTGGTCAGGGTCACGAAG
Suggested primer 2:GAAGTCTACGCCGTCGGTAG