Insertion junction: CLIP2.026975_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.026975
Chromosome:chromosome 3
Location:3799084
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g169800 (1 of 2) PTHR10060:SF22 - CELL DEATH-RELATED NUCLEASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCGGCGAGTGCGGCCTCGACTTCAATCGCAACTTCAGTCCGCCCGACGT
Internal bar code:AAGTAGGTCTGCTCTATTACAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1762
LEAP-Seq percent confirming:97.1429
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCCGATCACGTGGGATAG
Suggested primer 2:GCCAAACCAATGTCCCAACC