Insertion junction: CLIP2.026997_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.026997
Chromosome:chromosome 12
Location:8205067
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g551801 (1 of 1) PTHR12100//PTHR12100:SF0 - SEC10 // EXOCYST COMPLEX COMPONENT 5 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGCAGGTGGGCGGAGTGATGTTGGTGGGTGGTGTTTATTTCAATGGGG
Internal bar code:GGTTCGTCGGCTACCTATCCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:186
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:AGTGGATAGAGCAGGAGGGG
Suggested primer 2:TCCTTTCACTCCTCCGCAAC