Insertion junction: CLIP2.027009_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.027009
Chromosome:chromosome 3
Location:5088415
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g180300 SIR3 (1 of 1) 1.8.1.2 - Assimilatory sulfite reductase (NADPH) / Sulfite reductase (NADPH); Sulfite reductase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGATGTCGTAGCACTTGGTCAGCGCCTGCGCCAGCGGCATGCTGCCCCC
Internal bar code:TTTTATTTAGATAGCCCCGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4761
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:71
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:71

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTAACTCCGCAACTCCAT
Suggested primer 2:TTCTTGTGGACGTACACCGG