Insertion junction: CLIP2.027028_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.027028
Chromosome:chromosome 6
Location:2704575
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g270800 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGAGGCGTCGGCAACAGGCGCGTGGCTGCCCGAACGCCCGCCCGGTGCC
Internal bar code:CAGTTTAATACAATTTAATGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:815
LEAP-Seq percent confirming:93.5484
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:CACCATATTGCGGTGCATGG
Suggested primer 2:CCGGACCCAGCACAGTTAAT