Insertion junction: CLIP2.027031_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.027031
Chromosome:chromosome 10
Location:5934704
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g461000 (1 of 1) K14772 - U3 small nucleolar RNA-associated protein 20 (UTP20) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCTTCGCACACATCCCTCGCACACCCGTGCTGCTCACCCAACGCACCT
Internal bar code:TCGGTTGCCGAGGAAACGGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:736
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGTAGCAGGCCGTAGTAG
Suggested primer 2:TTCCCGTGGGTTAGTTCGTG