Insertion junction: CLIP2.027031_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.027031
Chromosome:chromosome 10
Location:5934705
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g461000 (1 of 1) K14772 - U3 small nucleolar RNA-associated protein 20 (UTP20) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGTAGGGTGTCTGGCCTCAGACTTGGTGGTAGGATGTCAGCAGGGGTC
Internal bar code:CTGACGGGCCAACGGGTGACAT

Confirmation - LEAP-Seq

LEAP-Seq distance:238
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TTCCCGTGGGTTAGTTCGTG
Suggested primer 2:GCAGTAGCAGGCCGTAGTAG