Insertion junction: CLIP2.027037_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.027037
Chromosome:chromosome 12
Location:5442286
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g529600 RPA1 DNA-directed RNA polymerase I subunit 1; (1 of 1) K02999 - DNA-directed RNA polymerase I subunit RPA1 (RPA1, POLR1A) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGCCCTTCCTAAGCGCCCCTGTCCCATCCACCATTTCCCGACTGCCTCT
Internal bar code:CATGCGCCCTTATATGAAGACT

Confirmation - LEAP-Seq

LEAP-Seq distance:1896
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GCGAAATGGCAGCATACCTG
Suggested primer 2:GGTGGTGAACTTTGACACGC